Table 2 Amino acid homology analysis of two RoAstVs to other AstVs.
From: Diversity of astroviruses in wild animals in Yunnan province, China
Strains | RoAstV-LH-36 | RoAstV-KM-5 | ||||
|---|---|---|---|---|---|---|
ORF1a(%) | ORF1b(%) | ORF2(%) | ORF1a(%) | ORF1b(%) | ORF2(%) | |
AY720892.1_Human astrovirus type 1 | 22.69a | 56.98 | 26.24 | 27.13 | 56.01 | 27.40 |
KT946729.1_Rodent_astrovirus_HK-12,111Â F | 86.19 | 92.20 | 75.48 | 30.99 | 57.93 | 28.70 |
HM450381.1_Astrovirus_rat/RS118/HKG/2007 | 26.18 | 55.71 | 25.01 | 25.70 | 57.63 | 25.89 |
OM451116.1_Civet_astrovirus _SC-F1 | NA* | NA | 64.24 | NA | NA | 27.58 |
OQ198049.1_Canine astrovirus isolate 319Â C | NA | NA | 42.11 | NA | NA | 29.21 |
OL695850.1_Procine astrovirus-4 AH4-3 | 45.71 | 70.02 | 26.96 | 29.90 | 56.56 | 24.39 |
sKM017741.1_Feline_astrovirus_D1 | 23.60 | 51.70 | 18.72 | 22.06 | 51.44 | 22.97 |
FJ571067.1_Bat_astrovirus Tm/Guangxi/LD71 | NA | NA | 20.21 | NA | NA | 22.48 |
KY765684.1_ Fox astrovirus 2016/BRA | 23.58 | 55.29 | 23.57 | 25.93 | 55.71 | 24.03 |
KY855439.1_Marmot_astrovirus_3 _HT12 | 44.84 | 67.03 | 43.64 | 31.94 | 56.82 | 31.31 |