Genetic variation of E6 and E7 genes of human papillomavirus type 16 from central China

Table 5 Predicted B‐cell epitopes of the HPV‐16 E6 gene

Reference sequence		Start position	Score	Variants sequence		Start position	Score
Rank	Sequence	Start position	Score	Rank	Sequence	Start position	Score
1	YSLYGTTLEQQYNKPL	88	0.87	1	IHEIILECVYCKQQLP	30	0.91
2	RDLCIVYRDGNPYAVC	55	0.86	2	YRDGNPYAVCDKCLTF	61	0.88
2	FHNIRGRWTGRCMSCC	132	0.86	3	LCIVYRDGSPYAVCDK	57	0.87
3	TAMFQDPQERPRKLPQ	6	0.85	3	YAVCDKCLTFYSKISE	67	0.87
				4	YSVYGTTLEQQYNKPL	88	0.86
				4	QTTIYDIILECVYCKQ	27	0.86
				4	RDLCIVYRDGNPYAVC	55	0.86
				4	FHNIRGRWTGRCMSCC	132	0.86
				5	TAMFQDPQERPRKLPQ	6	0.85
				5	QDPQERPRKVPQLCTE	10	0.85

ISSN: 1743-422X