Table 4 The number of predicted recombinants and recombination events identified using the RDP4.9 package within the genome sequences of grapevine Pinot gris virus (GPGV) isolates
From: The genetic variability of grapevine Pinot gris virus (GPGV) in Australia
Recombinant name | Breaking point locationa | Parents | Genes affectedc | Programs detected byd | ||||
|---|---|---|---|---|---|---|---|---|
Beginning | End | Major | % Similarityb | Minor | % Similarityb | |||
9.13 | 61 | 6139 | 9.9 | 97 | 5.13 | 98.6 | RdRp, MP | M, C, S, 3 |
9.14 | 4853 | 5942 | 8.33 | 99.1 | 9.1 | 96.9 | RdRp, MP | R, G, B, M, C, S, 3 |
9.1 | 1110 | 3819 | 9.9 | 98.0 | 8.47 | 97.5 | RdRp | R, G, B, M, C, S, 3 |
5.13 | 6139 | 6254 | 2.1 | 99.0 | Unknown | – | MP | R, G, B, S, 3 |