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Table 1 Study population characteristics and results of Multiplex Real-time PCR and Metagenomics approach (n = 94)

From: Analysis of viral diversity in stool samples from infants and children with acute gastroenteritis in Kuwait using Metagenomics approach

Sample No.

Age

Gender

Metagenomics sequencing results

No. of Reads

Multiplex Real-Time PCR results

CT value

1

1 yr

F

Rotavirus A

1

Rotavirus

26.48

2

2 yr

F

–

 

–

 

3

3 yr

M

–

 

–

 

4

2 mo

M

–

 

–

 

5

2 mo

M

–

 

–

 

6

6 yr

M

Human adenovirus E

4

–

 

7

2 yr

F

–

 

–

 

8

2 yr

M

Astrovirus MLB2

4

Human adenovirus

25.73

9

1 mo

M

–

 

–

 

10

2 yr

M

–

 

–

 

11

2 yr

M

Human adenovirus E

1

Human adenovirus

31.99

12

1 yr

M

–

 

Rotavirus

14.53

     

Human adenovirus

28.68

13

3 yr

M

–

 

–

 

14

3 yr

M

–

 

–

 

15

7 mo

M

–

 

Norovirus GII

16.33

16

3 yr

M

–

 

–

 

17

1 yr

M

–

 

Rotavirus

18.61

     

Human adenovirus

30.20

     

Sapporo virus

33.30

     

Norovirus GII

28.57

18

1 yr

M

Human adenovirus C

12

Human adenovirus

23.96

   

Human adenovirus E

2

Norovirus GII

17.33

   

Norovirus GII

11

  

19

4 yr

F

Enterovirus C

587

–

 
   

Enterovirus B

452

  
   

Enterovirus D

1

  

20

3 yr

M

–

 

Rotavirus

25.90

     

Human adenovirus

20.05

21

2 yr

F

Norovirus GII

2

Rotavirus

31.62

   

Human adenovirus C

1

Human adenovirus

33.00

22

1 yr

M

Primate bocaparvovirus-1

1

Rotavirus

32.65

23

1 yr

M

–

 

–

 

24

4 yr

M

–

 

–

 

25

1 yr

M

Human adenovirus C

1

Rotavirus

26.36

26

2 mo

F

–

 

–

 

27

3 mo

M

Human enterovirus

2

–

 

28

3 mo

M

–

 

–

 

29

1 yr

M

Enterovirus B

3

–

 

Sample No.

Age

Gender

Metagenomics sequencing results

No. of Reads

Multiplex Real-Time PCR results

CT value

30

4 mo

M

Human adenovirus F

744

Human adenovirus

12.31

   

Human adenovirus C

47

  
   

Human adenovirus B

9

  

31

3 yr

F

–

 

–

 

32

4 yr

M

Human adenovirus F

550

Human adenovirus

10.62

   

Human adenovirus B

12

  
   

Human adenovirus E

4

  
   

Human adenovirus C

4

  
   

Human adenovirus D

4

  

33

2 yr

M

Rotavirus A

41

Rotavirus

16.40

   

Human adenovirus C

 

Human adenovirus

26.55

    

1

  

34

2 yr

M

Astrovirus MLB2

1272

Human adenovirus

32.47

   

Human enterovirus

1

Norovirus GII

24.99

   

Enterovirus A

1

  

35

4 yr

F

–

 

Rotavirus

30.78

     

Human adenovirus

27.83

36

2 yr

M

Human adenovirus B

1

Human adenovirus

21.38

37

5 yr

F

Human adenovirus F

2

–

 

38

4 yr

M

–

 

–

 

39

1 yr

M

Rotavirus A

5

Rotavirus

14.65

   

Human enterovirus

1

Human adenovirus

24.82

   

Husavirus

2

  
   

Norovirus GII

1

  

40

8 mo

M

Human adenovirus F

436

Human adenovirus

12.48

   

Human adenovirus C

9

  

41

4 yr

M

Human adenovirus B

1

Rotavirus

32.64

   

Husavirus

1

Human adenovirus

19.34

42

4 yr

M

–

 

–

 

43

7 mo

F

–

 

Rotavirus

14.83

     

Human adenovirus

32.30

44

2 yr

M

Rotavirus A

3

Rotavirus

16.99

   

Human adenovirus B

1

Human adenovirus

32..82

45

2 yr

F

Cardiovirus (saffold)

8

Human astrovirus

32.51

   

Human adenovirus E

1

Human adenovirus

32.88

   

Torque teno virus-3

4

  
   

Torque teno virus-19

1

  

46

4 yr

M

–

 

Human adenovirus

26.44

47

2 yr

F

–

 

Rotavirus

19.81

     

Human adenovirus

28.67

Sample No.

Age

Gender

Metagenomics sequencing results

No. of Reads

Multiplex Real-Time PCR results

CT value

48

2 yr

F

Rotavirus A

105

Rotavirus

22.31

49

3 yr

F

–

 

Rotavirus

29.60

     

Human adenovirus

29.52

50

1 mo

M

–

 

–

 

51

4 mo

M

–

 

–

 

52

2 yr

F

Rotavirus A

2

Rotavirus

16.72

     

Human adenovirus

29.55

53

1 yr

M

–

 

–

 

54

1 yr

M

–

 

Rotavirus

32.55

55

5 yr

M

Rotavirus A

2

Rotavirus

12.85

     

Human adenovirus

32.62

56

1 yr

F

–

 

Rotavirus

21.22

     

Human adenovirus

32.30

57

10 mo

M

Rotavirus A

40

Rotavirus

17.84

58

2 mo

F

Human adenovirus A

1

Rotavirus

32.22

59

1 yr

M

Norovirus GII

10

Norovirus GII

15.87

   

Parechovirus A

1

Sapporo virus

18.42

     

Human adenovirus

32.51

60

1 yr

M

Rotavirus A

4

Rotavirus

16.78

   

Human adenovirus B

1

Human adenovirus

26.70

   

Aichi virus A

1

Norovirus GII

27.57

61

3 yr

M

Primate bocaparvovirus 1

6

Rotavirus

16.34

   

Human adenovirus B

1

Human adenovirus

29.83

   

Human adenovirus G

1

Norovirus GII

28.49

   

Norovirus GII

1

  

62

8 mo

M

–

 

Human adenovirus

32.87

     

Norovirus GII

31.84

63

3 yr

M

–

–

Rotavirus

20.27

     

Human adenovirus

30.71

     

Norovirus GII

28.94

64

1 yr

M

Rotavirus A

13

Rotavirus

18.31

65

3 yr

F

Astrovirus VA4

2

Human adenovirus

32.63

   

Torque teno virus

1

Norovirus GI

30.00

66

2 yr

M

Rotavirus A

5

Rotavirus

20.58

   

Parainfluenza virus 1

10

  

67

4 yr

M

–

 

–

 

68

7 yr

F

Human adenovirus B

5

–

 

69

1 mo

F

–

–

–

 

70

3 mo

M

–

–

–

 

71

3 yr

M

–

–

–

 

72

6 yr

M

Cosavirus F

1

Human adenovirus

31.84

   

Bufavirus-3

1

  

73

4 yr

F

Norovirus GII

1

–

 

Sample No.

Age

Gender

Metagenomics sequencing results

No. of Reads

Multiplex Real-Time PCR results

CT value

74

1 yr

M

Rotavirus A

18

Rotavirus

14.76

     

Human adenovirus

29.54

     

Sapporo virus

27.25

75

3 mo

M

–

–

–

 

76

1 mo

M

–

 

Human adenovirus

33.00

77

4 mo

M

Enterovirus C

11

–

 

78

1 yr

F

–

–

Human astrovirus

31.73

79

5 mo

F

Norovirus GII

3

Norovirus GII

16.96

80

6 mo

M

Norovirus GII

621

Norovirus GII

13.57

     

Human adenovirus

32.77

81

2 yr

F

Human adenovirus C

159

Rotavirus

30.97

   

Norovirus GII

26

Human adenovirus

23.34

     

Norovirus GII

16.51

82

2 yr

F

Norovirus GII

5

Norovirus GII

19.25

83

2 yr

M

Norovirus GII

33

Norovirus GII

16.88

84

5 yr

M

–

–

Rotavirus

19.36

85

2 yr

F

–

–

–

 

86

1 yr

M

–

–

–

 

87

3 yr

F

–

–

–

 

88

5 yr

M

Husavirus

1

–

 

89

4 yr

M

–

–

–

 

90

2 yr

M

–

–

–

 

91

4 yr

M

Human adenovirus C

1

Rotavirus

16.52

     

Human adenovirus

31.35

92

4 yr

F

–

–

–

 

93

4 yr

M

Rotavirus A

3

Rotavirus

16.44

94

2 yr

M

Astrovirus MLB2

1

–

Â