From: Whole genomic analysis of a potential recombinant human adenovirus type 1 in Qinghai plateau, China
Region | Nucleotide identity (%) | |||||
---|---|---|---|---|---|---|
QH-1665/2018 | ||||||
HAdV-C1 | HAdV-C2 | HAdV-C5 | HAdV-C6 | HAdV-C57 | HAdV-C89 | |
E1A | 99.43 | 98.74 | 99.08 | 98.74 | 98.62 | 98.74 |
E1B | 99.06 | 99.24 | 97.69 | 98.18 | 99.28 | 98.24 |
pIX | 100.00 | 99.53 | 99.76 | 99.53 | 100.00 | 99.53 |
Iva2 | 99.18 | 98.73 | 98.80 | 98.73 | 99.10 | 98.80 |
DNA polymearse | 99.28 | 98.86 | 98.72 | 98.89 | 99.16 | 98.80 |
pTP | 99.50 | 99.50 | 99.10 | 99.55 | 99.35 | 99.35 |
52 K | 99.36 | 99.84 | 98.56 | 99.68 | 99.36 | 99.68 |
pIIIa | 99.55 | 99.55 | 99.09 | 99.32 | 99.37 | 99.49 |
penton | 99.59 | 98.44 | 97.74 | 99.36 | 99.59 | 97.62 |
pVII | 99.50 | 98.66 | 99.00 | 99.83 | 99.83 | 99.16 |
V | 99.82 | 98.38 | 98.01 | 98.83 | 99.46 | 98.83 |
pX | 100.00 | 100.00 | 100.00 | 100.00 | 99.59 | 100.00 |
pVI | 99.60 | 97.60 | 97.08 | 96.68 | 96.40 | 99.07 |
hexon | 99.79 | 88.63 | 85.91 | 84.92 | 88.50 | 88.23 |
protease | 99.19 | 98.05 | 97.40 | 99.51 | 97.56 | 98.05 |
DBP | 99.69 | 97.11 | 96.67 | 96.98 | 96.86 | 97.61 |
100 K | 99.63 | 98.15 | 97.40 | 98.35 | 97.65 | 98.85 |
pVIII | 99.71 | 98.25 | 95.77 | 98.10 | 97.37 | 98.10 |
E3 | 99.36 | 82.95 | 84.41 | 82.97 | 82.97 | 82.88 |
fiber | 99.06 | 74.28 | 76.39 | 85.44 | 85.31 | 74.39 |
E4 | 99.08 | 99.20 | 99.50 | 98.93 | 98.66 | 98.24 |
Complete genome | 99.39 | 98.24 | 98.43 | 96.99 | 97.37 | 98.26 |