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Table 2 Reference strains used in this experiment and specificity results of the TaqMan real time RT-PCR

From: Development of a duplex TaqMan real-time RT-PCR assay for simultaneous detection of newly emerged H5N6 influenza viruses

Name of reference strains

Subtype

Ct/H5-FAM

Ct/N6-VIC

A/mallard/Sanjiang/390/2007

H1N1

undet

undet

A/mallard/Heilongjiang/135/2006

H2N2

undet

undet

A/mallard/Heilongjiang/90/2006

H3N2

undet

undet

A/duck/Guangxi/S-2-248/2009

H4N6

undet

22.05

A/Duck/GuangXi/1/2018

H5N6

15.87

14.97

A/mallard/Heilongjiang/81/2006

H6N2

undet

undet

A/equine/ jingfang/74–1

H7N7

undet

undet

A/turkey/ontario/6118/1968

H8N4

undet

undet

A/Turkey/Wisconsin/1/66

H9N2

undet

undet

A/Turkey/England/384/1979

H10N4

undet

undet

A/Duck/Memphis/546/1976

H11N9

undet

undet

A/duck/Alberta/60/1976

H12N5

undet

undet

A/gull/Maryland/704/1977

H13N6

undet

17.9

A/mallard/Gurjer/263/1982

H14N5

undet

undet

A/duck/Australia/341/83

H15N8

undet

undet

A/cormorant/Denmark/74–68,899-G2/02

H16N3

undet

undet

NDV

LaSota

undet

undet

NDV

F48E9

undet

undet

IBV

Lx4

undet

undet

IBDV

Gt

undet

undet