Table 3 Sequences used for phylogenetic analysis in this study
From: Genetic diversity of the Yokose virus, XYBX1332, isolated from bats (Myotis daubentonii) in China
Virus | Strain | Year | Country | Source | Accession No. |
|---|---|---|---|---|---|
Japanese encephalitis virus (JEV) | Ishikawa | 1994 | Japan | Swine | AB051292 |
Japanese encephalitis virus (JEV) | FU | 1995 | Australia | Human serum | AF217620 |
Japanese encephalitis virus (JEV) | p3 | 1949 | China | Human brain | U47032 |
Japanese encephalitis virus (JEV) | JKT6468 | 1981 | Indonesia | Culex tritaeniorhynchus | AY184212 |
Japanese encephalitis virus (JEV) | Muar | 1952 | Malaysia | Human brain | HM596272 |
Murray Valley encephalitis virus (MVEV) | MVE-1-51 | 1951 | Australia | Human brain | NC_000943 |
West Nile virus (WNV) | ArB3573/82 | Central African Republic | DQ318020 | ||
Kunjin virus (KUNV) | MRM61C | Australia | Mosquito | D00246 | |
St. Louis encephalitis virus (SLEV) | Kern217 | USA | Mosquito | DQ525916 | |
Zika virus | MR766-NIID | 1947 | Uganda | Monkey | LC002520 |
Zika virus | ZikaSPH2015 | 2015 | Brazil | Human | KU321639 |
Dengue virus 4 (DENV4) | 341,750 | 1982 | Colombia | Human | GU289913 |
Dengue virus 2 (DENV2) | D2/SG/05K4155DK1/2005 | 2005 | Singapore | Human blood | EU081180 |
Dengue virus 1 (DENV1) | SG(EHI)D1227Y03 | 2003 | Singapore | FJ469909 | |
Dengue virus 3 (DENV3) | D3/H/IMTSSA-MART/1999/1243 | 1999 | Martinique (French West Indies) | Human blood | AY099337 |
Yellow fever virus (YFV) | YFV17D | X03700 | |||
Yokose virus(YOKV) | XYBX1332 | 2013 | China | Bat | – |
Yokose virus(YOKV) | Oita-36 | 1971 | Japan | Bat | AB114858 |
Powassan virus (POWV) | Spassk-9 | 1975 | Russia | Dermacentor silvarum (tick) | EU770575 |
Langat virus (LANV) | TP21 | Tick | NC_003690 | ||
Louping ill virus (LIV) | 369/T2 | UK | NC_001809 | ||
Tick-borne encephalitis virus (TBEV) | Toro-2003 | 2003 | Sweden: Toro | Ixodes ricinu | DQ401140 |
Culex flavivirus | Tokyo | 2003 | Japan | Culex pipiens | AB262759 |