Table 2 Summary of the transcriptome results
From: Transcriptome analysis of Cucumis sativus infected by Cucurbit chlorotic yellows virus
Library | CCYV-infected | Mock-inoculated | ||||
|---|---|---|---|---|---|---|
CCYV-1 | CCYV-2 | CCYV-3 | CK-1 | CK-2 | CK-3 | |
Total clean reads | 34158314 | 39138040 | 29823892 | 32161272 | 36948220 | 33314552 |
High quality clean reads | 33769294 (98.86%) | 38661136 (98.78%) | 29444160 (98.73%) | 31754492 (98.74%) | 36473130 (98.71%) | 32946276 (98.89%) |
Unique mapped reads | 31165849 (92.37%) | 35530271 (91.97%) | 26854505 (91.28%) | 29004918 (91.46%) | 33297555 (91.40%) | 30220259 (91.85%) |
Number of mapped gene | 17842 (76.75%) | 18016 (77.49%) | 17803 (76.58%) | 17729 (76.26%) | 17732 (76.27%) | 17717 (76.21%) |