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Table 1 Sample species collected and analyzed, collection place, molecular markers used in RT-PCR and GenBank accession numbers for cloned coat proteins

From: High throughput sequencing from Angolan citrus accessions discloses the presence of emerging CTV strains

Sample species and isolate code

Location

T36CPa

T36pola

VTpola

T3K17a

Cloned CP codes and GenBank accession numbers

1A C. sinensis

Nursery

    

1B C. sinensis

Nursery

    

1C AO1

C. sinensis

Nursery

 + 

 + 

AO1.4, MW388800

2A C. limon Eureka

Nursery

    

2B AO2

C. sinensis Bahia

Nursery

 + 

 + 

AO2.3, MW388801

2C AO3

C. reticulata

Nursery

 + 

 + 

AO3.1, MW388802

2D Lime Tahiti

Nursery

    

3A AO4

C. sinensis Bahia

Orchard (Quinta do Pomares)

 + 

 + 

AO4.3, MW388803

4A AO5

C. sinensis Bahia

Nursery

 + 

 + 

AO5.1, MW388804;

AO5.3, MW388805;

AO5.4, MW388806

7A C. sinensis Bahia

Orchard (Quinta do Pomares)

    

7B C. sinensis Bahia

Orchard (Quinta do Pomares)

    
  1. aMolecular markers as described in [22]