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Fig. 2 | Virology Journal

Fig. 2

From: Metagenomic analyses and genetic diversity of Tomato leaf curl Arusha virus affecting tomato plants in Kenya

Fig. 2

Phylogenetic analyses of tomato leaf curl virus from Kenya (n = 12) with selected worldwide begomoviruses based on alignment of complete DNA-A nucleotide sequences. The tree was generated using the maximum likelihood inference based on the Jukes-Cantor model as implemented in MEGA v.6.06 [37]. Percentage bootstrap support values (1,000 iterations) are indicated at the branch nodes. The tree is rooted with Tomato leaf curl purple vein virus (accession number KY196216) as an outgroup. The scale bar shows the number of nucleotide substitutions power site. Details of all the isolates are provided in Additional file 2: Table S1

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