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Table 1 Primers used for PCR

From: A substitution in the pre-S1 promoter region is associated with the viral regulation of hepatitis B virus

Name

Sequence (5′ to 3′)

Annotation

S1

ATGCCTGCTAGGTTCTATCC

HBV 2637–2656 (sense)

S2

AGACTCTGTGGTATTGTGAGG

HBV 229–249 (antisense)

W1

TTCACCTCTGCCTAATCATCTCATG

HBV 1824–1848 (sense)

W2

AAGTTGCATGGTGCTGGTGAAC

HBV 1801–1822 (antisense)

F1

CGACTCAGGAAACTGCCTGTAAATAGAC

HBV 950–970, pTac1 404–410 (sense)

F2

AGAGCTTGGTGGAATGTTGTG

HBV 4–24 (antisense)

F3

ATTCCACCAAGCTCTGCTAG

HBV 10–29 (sense)

F4

CCAAGCTAGAAGGAAAGAAGTCAGAAGG

HBV 1958–1978, pTac1 498–504 (antisense)

F5

CAGTTTCCTGAGTCGTATTACGCGCTGG

pTac1 391–410, HBV 950–957 (antisense)

F6

TTCCTTCTAGCTTGGCGTAATCATGGTC

pTac1 498–517, HBV 1971–1978 (sense)

L1

AGActcgagCTTGGACAAAGGCATTAAAC

XhoI, HBV 2678–2697 (sense)

L2

AGGagatctGAGGCGCTGCGTGTAGTTTC

BglII, HBV 2787–2806 (antisense)

S3

TGAGTCGTATTACGCGCTGG

pTac1 391–410 (antisense)

m5

AAAGCTGGCATTCTATATAAAAGAG

HBV 2763–2787, Sp1 G2765A (sense)

m9

GCGACATAAGTTCTATATAAAAGAG

HBV 2763–2787, Sp1 whole nucleotide mutation (sense)

mR

CCACAGAGTATGTAAATAATGCC

HBV 2740–2762 (antisense)

  1. Nucleotides that were substituted with wild type are indicated in bold. Abbreviations: PCR polymerase chain reaction, HBV hepatitis B virus