Table 3 Entire VP1 gene nucleotide sequences of the HEV71 strains used to generate the HEV71 phylogenetic dendrograms.
Strain | Source | GenBank No. | Strain | Source | GenBank No. |
|---|---|---|---|---|---|
HEV71/BrCr/USA/70 | GenBank | U22521 | TC23F/SD/CHN/2007 | GenBank | EU753417 |
CVA16/G-10 | GenBank | U05876 | CY11/BJ/CHN/2008 | GenBank | FJ469153 |
Nagoya/JPN/73 | GenBank | AB059813 | CY15/BJ/CHN/2008 | GenBank | FJ469154 |
2952/USA/81 | GenBank | AF135888 | DTID-ZJU-62/ZJ/CHN/2008 | GenBank | FJ158600 |
0915/USA/87 | GenBank | AF009549 | DTID-ZJU-74/ZJ/CHN/2008 | GenBank | FJ158600 |
2641/AUS/95 | GenBank | AF135947 | GDFS-3/GD/CHN/2008 | GenBank | FJ194964 |
SK-EV006-SAR/MAS/97 | GenBank | AB059819 | GDSG-17/GD/CHN/2008 | GenBank | FJ194965 |
C7/Osaka/JPN/97 | GenBank | AB059818 | FY23/AH/CHN/2008 | GenBank | EU812515 |
SB12007-SAR/MAS/03 | GenBank | AY905548 | Fuyang22/AH/CHN/2008 | GenBank | EU913466 |
933V/VNM/05 | GenBank | AM49061 | Fuyang26/AH/CHN/2008 | GenBank | EU913468 |
540V/VNM/05 | GenBank | AM490151 | WH-4-08/WH/CHN/2008 | GenBank | FJ765433 |
SI01/THA/06 | GenBank | EF203407 | WH-3-08/WH/CHN/2008 | GenBank | FJ765432 |
1827-Yamagata/JPN/07 | GenBank | AB433890 | Kunming24-08/YN/CHN/2008 | GenBank | FJ765425 |
122242/THA/08 | GenBank | FJ151494 | 562AH-08/AH/CHN/2008 | GenBank | FJ765420 |
AFP98111341/TAI/98 | GenBank | DQ841953 | WH-8-08/WH/CHN/2008 | GenBank | FJ765434 |
N3340/TAI/98 | GenBank | EU131776 | SZ-C-08/SZ/CHN/2008 | GenBank | FJ765429 |
E2004104/TAI/04 | GenBank | DQ841964 | 552-AH-08/AH/CHN/2008 | GenBank | FJ765418 |
E20051733/TAI/05 | GenBank | DQ841971 | CC01-08/CC/CHN/2008 | GenBank | FJ765424 |
1946-FR-2008 | GenBank | FJ824736 | 559-AH-08/AH/CHN/2008 | GenBank | FJ765419 |
1416-FR-2007 | GenBank | FJ824734 | 549-AH-08/AH/CHN/2008 | GenBank | FJ765417 |
97-56/HLJ/CHN/97 | GenBank | AB115494 | Kunming29-08/YN/CHN/2008 | GenBank | FJ765426 |
ShZh98/GD/CHN/98 | GenBank | AF302996 | BJCDC01-08/BJ/CHN/2008 | GenBank | FJ765424 |
H25/SH/CHN/2000 | GenBank | AB115492 | SZ-H-08/SZ/CHN/2008 | GenBank | FJ765430 |
F1/SH/CHN/2000 | GenBank | AB115490 | BJCDC03-08/BJ/CHN/2008 | GenBank | FJ765423 |
F2/SH/CHN/2000 | GenBank | AB115491 | EV71/Fuyang.Anhui.CHN/17.08/1 | This study | EU703812 |
ShZh01-3/CHN/2001 | GenBank | AY895132 | EV71/Fuyang.Anhui.CHN/17.08/2 | This study | EU703813 |
SHH02-17/SH/CHN/2002 | GenBank | AY547500 | EV71/Fuyang.Anhui.CHN/17.08/3 | This study | EU703814 |
ShZh02-62/CHN/2002 | GenBank | AY895136 | EV71/Fuyang.Anhui.CHN/17.08/5 | This study | GQ121418 |
ZJ03-1/ZJ/CHN/2003 | GenBank | AY905614 | EV71/Fuyang.Anhui.CHN/17.08/7 | This study | GQ121420 |
CQ03-1/CQ/CHN/2003 | GenBank | AY547501 | EV71/Fuyang.Anhui.CHN/17.08/8 | This study | GQ121421 |
ShZh03-106/GD/CHN/2003 | GenBank | AY895138 | EV71/Fuyang.Anhui.CHN/17.08/4 | This study | GQ121423 |
ShZh04-3/GD/CHN/2004 | GenBank | AY895142 | EV71/Fuyang.Anhui.CHN/19.08/7 | This study | GQ121424 |
0708T/NM/CHN/2007 | GenBank | EU910861 | EV71/Fuyang.Anhui.CHN/18.08/1 | This study | GQ121427 |
0709T/NM/CHN/2007 | GenBank | EU910862 | EV71/Fuyang.Anhui.CHN/17.08/13 | This study | GQ121428 |
BJ4211/BJ/CHN/2007 | GenBank | EU024958 | EV71/Fuyang.Anhui.CHN/18.08/3 | This study | GQ121431 |
BJ4243/BJ/CHN/2007 | GenBank | EU019910 | EV71/Fuyang.Anhui.CHN/19.08/1 | This study | GQ121433 |
521-19T/SD/CHN/2007 | GenBank | EU753376 | EV71/Fuyang.Anhui.CHN/18.08/8 | This study | GQ121436 |
523-05T/SD/CHN/2007 | GenBank | EU753397 | EV71/Fuyang.Anhui.CHN/19.08/6 | This study | GQ121441 |
523-11T/SD/CHN/2007 | GenBank | EU753402 | Â | Â | Â |