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Table 1 Average % pairwise identity detected among HRV nucleotide sequences

From: Genome-wide diversity and selective pressure in the human rhinovirus

Genome locus

HRV ave (min, max)*

HRVA ave (min, max)**

HRVB ave (min, max)#

HRVAvsHRVB ave (min, max)$

Genome

68 (56,88)

74 (69,88)

75 (71,82)

57 (56,58)

5'NCR

77 (64,95)

82 (74,95)

84 (78,91)

68 (64,71)

1A

74 (53,90)

82 (75,90)

80 (75,86)

58 (53,63)

1B

69 (59,88)

73 (66,88)

74 (69,78)

62 (59,65)

1C

66 (53,87)

71 (65,87)

73 (66,80)

56 (53,59)

1D

63 (48,87)

70 (63,87)

72 (68,78)

50 (48,53)

2A

68 (43,89)

78 (68,89)

73 (68,81)

48 (43,52)

2B

67 (46,87)

75 (63,87)

75 (66,82)

52 (46,57)

2C

67 (53,89)

72 (61,89)

76 (70,84)

55 (53,57)

3A

67 (49,91)

72 (60,91)

76 (67,86)

55 (49,61)

3B

69 (48,94)

75 (48,94)

70 (54,86)

57 (48,70)

3C

68 (53,88)

75 (68,88)

73 (69,83)

56 (53,60)

3D

69 (58,87)

73 (67,87)

74 (70,82)

60 (58,62)

3'NCR

ND

ND

ND

ND

  1. *n = 34; **n = 27; #n = 7; $n = 34